Tools


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ENEO is a Snakemake workflow to identify candidate tumor neoantigens from tumor-only RNA-seq data.
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Isoworm is a Snakemake workflow to quantify isoforms expression levels in large RNA-seq datasets and find poly-A sites.
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ReViewCNV is a containerized Shiny App for the visualization of germinal Copy Number Variants (CNVs) from any bioinformatic tool.
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miXer is a Machine-Learning-based CNV caller for exome sequencing data that leverages X-chromosome exome reads.